#Best Practices

Nearline FHIR® Ingestion to InterSystems OMOP from AWS HealthLake

Thirteen years ago, I attained dual undergraduate degrees in electrical engineering and math, then promptly started full-time at InterSystems using neither. One of my most memorable and stomach-churning academic experiences was in Stats II. On an exam, I was solving a moderately difficult confidence interval problem. I was running out of time, so (being an engineer) I wrote out the definite integral on the exam paper, punched it into my graphing calculator, wrote an arrow with “calculator” over it, then wrote the result.

Introduction

In InterSystems IRIS 2024.3 and subsequent IRIS versions, the AutoML component is now delivered as a separate Python package that is installed after installation. Unfortunately, some recent versions of Python packages that AutoML relies on have introduced incompatibilities, and can cause failures when training models (TRAIN MODEL statement). If you see an error mentioning "TypeError" and the keyword argument "fit_params" or "sklearn_tags", read on for a quick fix.

Introduction

In today's rapidly evolving threat landscape, organizations deploying mission-critical applications must implement robust security architectures that protect sensitive data while maintaining high availability and performance. This is especially crucial for enterprises utilizing advanced database management systems like InterSystems IRIS, which often powers applications handling highly sensitive healthcare, financial, or personal data.

Professional Grade FHIR® to OMOP Transformation

InterSystems OMOP, The Cloud Service (Troy)

Using embedded Python while building your InterSystems-based solution can add very powerful and deep capabilities to your toolbox.

I'd like to share one sample use-case I encountered - enabling a CDC (Change Data Capture) for a mongoDB Collection - capturing those changes, digesting them through an Interoperability flow, and eventually updating an EMR via a REST API.

An experiment on how to use the LangChain framework, IRIS Vector Search, and LLMs to generate IRIS-compatible SQL from user prompts.

This article was based in this notebook. You can run it with a ready to use environment with this application in OpenExchange.

Setup

First, we need to install the necessary libraries:

Hi - Recently I have been investigating an annoying situation whilst editing ObjectScript classes or routines in VSCode.

What was happening to me was, as I was typing in lines of code into my class (for example, adding a new Method, or changing the Class signature, or a block of code), this would quickly get syntax checked, re-formatted, and compiled - inevitably, (since I would be mid-way through my typing), this would generate compilation errors.

InterSystems IRIS provides a complete application development environment for building sophisticated data- and analytics-intensive applications that connect data and application silos. It is designed to work with all of the common development technologies in an open, standards-based fashion and supports both server-side and client-side programming.

In the business world, every second counts, and having high-performing applications is essential for streamlining our business processes. We understand the significance of crafting efficient algorithms, measurable through the big O notation.

What I find really useful about IRIS when teaching my subject of Postrelational databases is the fact that it is a multi model database. Which means that I can actually go into architecture and structure and all that only once but then show the usage of different models (like object, document, hierarchy) using the same language and approach. And it is not a huge leap to go from an object oriented programming language (like C#, Java etc) to an object oriented database.

However, along with advantages (which are many) come some drawbacks when we switch from object oriented model to relational. When I say that you can get access to the same data using different models I need to also explain how it is possible to work with lists and arrays from object model in relational table. With arrays it is very simple - by default they are represented as separate tables and that's the end of it. With lists - it's harder because by default it's a string. But one still wants to do something about it without damaging the structure and making this list unreadable in the object model.

So in this article I will showcase a couple of predicates and a function that are useful when working with lists, and not just as fields.

One of the pain points for maintaining HL7 interfaces is the need to run a reliable regression test upon deployment to new environments and after upgrades. The %UnitTest class allows unit tests to be created and packaged alongside interface code. Test data can also be maintained within the unit test class, allowing for quick and easily repeatable smoke-testing and regression testing.

Resources:

• Standard %UnitTest class

Artificial Intelligence (AI) is getting a lot of attention lately because it can change many areas of our lives. Better computer power and more data have helped AI do amazing things, like improving medical tests and making self-driving cars. AI can also help businesses make better decisions and work more efficiently, which is why it's becoming more popular and widely used. How can one integrate the OpenAI API calls into an existing IRIS Interoperability application?