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#Best Practices

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Best Practices recommendations on how to develop, test, deploy and manage solutions on InterSystems Data Platforms better. 

We resume our series of articles on the FHIR Adapter tool available to HealthShare HealthConnect and InterSystems IRIS users.

In the previous articles we have presented the small application on which we set up our workshop and showed the architecture deployed in our IRIS instance after installing the FHIR Adapter. In today's article we will see an example of how we can perform one of the most common CRUD (Create - Read - Update - Delete) operations, the reading operation, and we will do it by recovering a Resource.

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Overview

We started to use Azure Service Bus (ASB) as an enterprise messaging solution 3 years ago. It is being used to publish and consume data between many applications in the organization. Since the data flow is complex, and one application’s data is usually needed in multi applications the “publisher” ---> ”multiple subscribers” model was a great fit. The ASB usage in the organization is dozens of millions of messages per day, while IRIS platform is having around 2-3 million messages/day.

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image

This article will cover turning over control of provisioning the InterSystems Kubernetes Operator, and starting your journey managing your own "Cloud" of InterSystems Solutions through Git Ops practices. This deployment pattern is also the fulfillment path for the PID^TOO||| FHIR Breathing Identity Resolution Engine.

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Python has become the most used programming language in the world (source: https://www.tiobe.com/tiobe-index/) and SQL continues to lead the way as a database language. Wouldn't it be great for Python and SQL to work together to deliver new functionality that SQL alone cannot? After all, Python has more than 380,000 published libraries (source: https://pypi.org/) with very interesting capabilities to extend your SQL queries within Python.

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In this article, we will run an InterSystems IRIS cluster using docker and Merge CPF files - a new feature allowing you to configure servers with ease.

On UNIX® and Linux, you can modify the default iris.cpf using a declarative CPF merge file. A merge file is a partial CPF that sets the desired values for any number of parameters upon instance startup. The CPF merge operation works only once for each instance.

Our cluster architecture is very simple, it would consist of one Node1 (master node) and two Data Nodes (check all available roles). Unfortunately, docker-compose cannot deploy to several servers (although it can deploy to remote hosts), so this is useful for local development of sharding-aware data models, tests, and such. For a productive InterSystems IRIS Cluster deployment, you should use either ICM or IKO.

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Hi, developers!

Currently, I'm working on a project that requires highly dynamic event management. In the context of the Java programming language, my first instinct should be to opt for the "Observer Pattern", which is an approach to managing interactions between objects by establishing a notification mechanism. It allows multiple observers to react to changes in the state of a subject autonomously, promoting code flexibility and modularity. If you are not familiar with this design pattern, check out Wikipedia to find more information about it.


While it's natural and commonly used in certain programming languages as Java and C++, in ObjectScript, it's quite a different story.

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Loading your IRIS Data to your Google Cloud Big Query Data Warehouse and keeping it current can be a hassle with bulky Commercial Third Party Off The Shelf ETL platforms, but made dead simple using the iris2bq utility.

Let's say IRIS is contributing to workload for a Hospital system, routing DICOM images, ingesting HL7 messages, posting FHIR resources, or pushing CCDA's to next provider in a transition of care. Natively, IRIS persists these objects in various stages of the pipeline via the nature of the business processes and anything you included along the way. Lets send that up to Google Big Query to augment and compliment the rest of our Data Warehouse data and ETL (Extract Transform Load) or ELT (Extract Load Transform) to our hearts desire.

A reference architecture diagram may be worth a thousand words, but 3 bullet points may work out a little bit better:

  • It exports the data from IRIS into DataFrames
  • It saves them into GCS as .avro to keep the schema along the data: this will avoid to specify/create the BigQuery table schema beforehands.
  • It starts BigQuery jobs to import those .avro into the respective BigQuery tables you specify.

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Article
· Jan 2, 2022 3m read
DB Migration using SQLgateway

Thanks to @Yuri Marx we have seen a very nice example for DB migration from Postgres to IRIS.
My personal problem is the use of DBeaver as a migration tool.
Especially as one of the strengths of IRIS ( and also Caché) before is the availability of the
SQLgateways that allow access to any external Db as long as for them an access usinig
JDBC or ODBC is available. So I extended the package to demonstrate this.

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Article
· Apr 26, 2017 2m read
How to install and use TFS in Atelier

Hi,

This is a quick tutorial how to install and use TFS in Atelier. It is based on my self experience and some tricks that I 've noted.

If you are used to using visual studio maybe you feel that is a bit slow and heavy, but you have the same TFS panel as you have in Visual Studio, so don't need any special "training" to use it smiley

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In this article, I would show how you can upload and download files from InterSystems products via http.

The questions about working with files over http arise fairly often on community and I'm usually linking to my FileServer project which demonstrates file upload/download but I'd like to talk a bit more on how we can serve and receive files from InterSystems products.

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Article
· Oct 18, 2016 7m read
Macros in the InterSystems Caché

In this article I would like to tell you about macros in InterSystems Caché. A macro is a symbolic name that is replaced with a set of instructions during compilation. A macro can “unfold” in various instruction sets each time it is called, depending on the parameters passed to it and activated scenarios. This can be both static code and the result of ObjectScript execution. Let's take a look at how you can use them in your application.

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The %Net.SSH.Session class lets you connect to servers using SSH. It's most commonly used with SFTP, especially in the FTP inbound and outbound adaptors.

In this article, I'm going to give a quick example of how to connect to an SSH server using the class, describe your options for authenticating, and how to debug when things go wrong.

Here's an example of making the connection:

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The last time that I created a playground for experimenting with machine learning using Apache Spark and an InterSystems data platform, see Machine Learning with Spark and Caché, I installed and configured everything directly on my laptop: Caché, Python, Apache Spark, Java, some Hadoop libraries, to name a few. It required some effort, but eventually it worked.

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If a picture is worth a thousand words, what's a video worth? Certainly more than typing a post.

Please check out my "Coding talks" on InterSystems Developers YouTube:

1. Analysing InterSystems IRIS System Performance with Yape. Part 1: Installing Yape

https://www.youtube.com/embed/3KClL5zT6MY
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Running Yape in a container.

2. Yape Container SQLite iostat InterSystems

https://www.youtube.com/embed/cuMLSO9NQCM
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Extracting and plotting pButtons data including timeframes and iostat.

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We are ridiculously good at mastering data. The data is clean, multi-sourced, related and we only publish it with resulting levels of decay that guarantee the data is current. We chose the HL7 Reference Information Model (RIM) to land the data, and enable exchange of the data through Fast Healthcare Interoperability Resources (FHIR®).

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Article
· Aug 26, 2016 8m read
Enterprise Monitor and HealthShare

Enterprise Monitor is a component of Ensemble and can help organizations monitor multiple productions running on different namespaces within the same instance or namespaces running on multiple instances.

Documentation can be found at:

http://docs.intersystems.com/ens20161/csp/docbook/DocBook.UI.Page.cls?KEY=EMONITOR_all#EMONITOR_enterprise

In Ensemble 2016.1 there were changes made to make this utility work with HealthShare environments.

This article will:

  • Show how to set up Enterprise Monitor for HealthShare sites
  • Show some features of Enterprise Monitor
  • Show some features of Enterprise Message Viewer

For this article, I used the following version of HealthShare:

Cache for Windows (x86-64) 2016.1 (Build 656U) Fri Mar 11 2016 17:42:42 EST [HealthShare Modules:Core:14.02.2415 + Linkage Engine:14.02.2415 + Patient Index:14.02.2415 + Clinical Viewer:14.02.2415 + Active Analytics:14.02.2415]

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Over the last couple of weeks the Solution Architecture team has been working to finish off our 2019 workload: this included open-sourcing the Readmission Demo that was brought to HIMSS last year, so we could make it available to anyone looking for an interactive-way of exploring the tooling provided by IRIS.

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Article
· Nov 14, 2016 14m read
Mastering the JDBC SQL Gateway

As we all know, Caché is a great database that accomplishes lots of tasks within itself. However, what do you do when you need to access an external database? One way is to use the Caché SQL Gateway via JDBC. In this article, my goal is to answer the following questions to help you familiarize yourself with the technology and debug some common problems.

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If you've worked with iKnow domain definitions, you know they allow you to easily define multiple data locations iKnow needs to fetch its data from when building a domain. If you've worked with DeepSee cube definitions, you'll know how they tie your cube to a source table and allow you to not just build your cube, but also synchronize it, only updating the facts that actually changed since the last time you built or synced the cube. As iKnow also supports loading from non-table data sources like files, globals and RSS feeds, the same tight synchronization link doesn't come out of the box. In this article, we'll explore two approaches for modelling DeepSee-like synchronization from table data locations using callbacks and other features of the iKnow domain definition infrastructure.

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Article
· Jul 27, 2018 4m read
Load a ML model into InterSystems IRIS

Hi all. Today we are going to upload a ML model into IRIS Manager and test it.

Note: I have done the following on Ubuntu 18.04, Apache Zeppelin 0.8.0, Python 3.6.5.

Introduction

These days many available different tools for Data Mining enable you to develop predictive models and analyze the data you have with unprecedented ease. InterSystems IRIS Data Platform provide a stable foundation for your big data and fast data applications, providing interoperability with modern DataMining tools.

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As a developer, you have probably spent at least some time writing repetetive code. You may have even found yourself wishing you could generate the code programmatically. If this sounds familiar, this article is for you!

We'll start with an example. Note: the following examples use the %DynamicObject interface, which requires Caché 2016.2 or later. If you are unfamiliar with this class, check out the documentation here: Using JSON in Caché. It's really cool!

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Continuing on with providing some examples of various storage technologies and their performance profiles, this time we looked at the growing trend of leveraging internal commodity-based server storage, specifically the new HPE Cloudline 3150 Gen10 AMD processor-based single socket servers with two 3.2TB Samsung PM1725a NVMe drives.

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A few years ago, I was teaching the basics of our %UnitTest framework during Caché Foundations class (now called Developing Using InterSystems Objects and SQL). A student asked if it was possible to collect performance statistics while running unit tests. A few weeks later, I added some additional code to the %UnitTest examples to answer this question. I’m finally sharing it on the Community.

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Article
· Apr 17, 2017 4m read
Debugging Web

In this article I'll cover testing and debugging Caché web applications (mainly REST) with external tools. Second part covers Caché tools.

You wrote server-side code and want to test it from a client or already have a web application and it doesn't work. Here comes debugging. In this article I'll go from the easiest to use tools (browser) to the most comprehensive (packet analyzer), but first let's talk a little about most common errors and how they can be resolved.

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Released with no formal announcement in IRIS preview release 2019.4 is the /api/monitor service exposing IRIS metrics in Prometheus format. Big news for anyone wanting to use IRIS metrics as part of their monitoring and alerting solution. The API is a component of the new IRIS System Alerting and Monitoring (SAM) solution that will be released in an upcoming version of IRIS.

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