In the previous article, we've discussed the origin of the standard HL7v2, the structure and the types of messages. Let's now look at one of the most used types of messages and an example of its structure. I'm talking about ADT.

HL7 ADT messages (Admit, Discharge, Transfer) are used to communicate basic patient information, visit information and patient state at a healthcare facility. ADT messages are one of the most widely-used and high volume HL7 message types, as it provides information for many trigger events including patient admissions, registrations, cancellations, updates, discharges, patient data merges, etc.

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Hi Community,

This post is a introduction of my openexchange iris-python-apps application. Build by using Embedded Python and Python Flask Web Framework.
Application also demonstrates some of the Python functionalities like Data Science, Data Plotting, Data Visualization and QR Code generation.

image

Features

  • Responsive bootstrap IRIS Dashboard

  • View dashboard details along with interoperability events log and messages.

  • Use of Python plotting from IRIS

  • Use of Jupyter Notebook

  • Introduction to Data Science, Data Plotting and Data Visualization.

  • QR Code generator from python.

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Hello, developers!

In this series, I will not show you how to use IRIS for Health, but rather how to use SUSHI, a tool for creating FHIR profiles, as an associated technology.

With the right tools, the profile information (specifications, limitations, extensions, etc.) of a FHIR project can be well organized and published.

Before we begin, what is SUSHI? I will briefly explain it.

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Article
· Apr 5, 2022 4m read
Serializing Python objects in globals

Motivation

This project was thought of when I was thinking of how to let Python code deal naturally with the scalable storage and efficient retrieving mechanism given by IRIS globals, through Embedded Python.

My initial idea was to create a kind of Python dictionary implementation using globals, but soon I realized that I should deal with object abstraction first.

So, I started creating some Python classes that could wrap Python objects, storing and retrieving their data in globals, i.e., serializing and deserializing Python objects in IRIS globals.

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In the previous article, we've seen the structure of one of the most used types of HL7 message - ADT (Admit, Discharge, Transfer) and an example of ADT^A04 with the description of all its fields. Now let's look at another flow of data having to do with ordering and fulfilling the orders of tests. I'm talking about ORM (as of version 2.5 you should use specific messages to order tests, like OMG, OML, OMD, OMS, OMN, OMI, and OMP), ORL and ORU messages. In a very simplified case, the exchange of data may look like this.

Let's look at these messages in more detail.

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Article
· Nov 4, 2022 9m read
VIP in AWS

If you're running IRIS in a mirrored configuration for HA in AWS, the question of providing a Mirror VIP (Virtual IP) becomes relevant. Virtual IP offers a way for downstream systems to interact with IRIS using one IP address. Even when a failover happens, downstream systems can reconnect to the same IP address and continue working.

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Overview

Predictable storage IO performance with low latency is vital to provide scalability and reliability for your applications. This set of benchmarks is to inform users of IRIS considering deploying applications in AWS about EBS gp3 volume performance.

Summary

  • An LVM stripe can increase IOPS and throughput beyond single EBS volume performance limits.
  • An LVM stripe lowers read latency.
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Article
· Aug 2, 2022 8m read
Data models in InterSystems IRIS

Before we start talking about databases and different data models that exist, first we'd better talk about what a database is and how to use it.

A database is an organized collection of data stored and accessed electronically. It is used to store and retrieve structured, semi-structured, or raw data which is often related to a theme or activity.

At the heart of every database lies at least one model used to describe its data. And depending on the model it is based on, a database may have slightly different characteristics and store different types of data.

To write, retrieve, modify, sort, transform or print the information from the database, a software called Database Management System (DBMS) is used.

The size, capacity, and performance of databases and their respective DBMS have increased by several orders of magnitude. It has been made possible by technological advances in various areas, such as processors, computer memory, computer storage, and computer networks. In general, the development of database technology can be divided into four generations based on the data models or structure: navigational, relational, object and post-relational.

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Here you'll find a simple program that uses Python in an IRIS environment and another simple program that uses ObjectScript in a Python environment. Also, I'd like to share a few of the troubles I went trough while learning to implement this.

Python in IRIS environment

Let's say, for example, you're in an IRIS environment and you want to solve a problem that you find easy, or more efficient with Python.

You can simply change the environment: create your method as any other, and in the end of it's name and specifications, you add [ Language = python ]:

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I have recently come across a problem saving TrakCare reports as PDF files while using the MS Edge browser on a Windows 10 PC. Whenever a user selected the Save to PDF option the window Tab would crash and reset. The event was trapped and viewable in the Windows Events Viewer and showed a Fault in the AcroPDFImpl64.dll.

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What is Web Scraping:

In simple terms, Web scraping, web harvesting, or web data extraction is an automated process of collecting large data(unstructured) from websites. The user can extract all the data on particular sites or the specific data as per the requirement. The data collected can be stored in a structured format for further analysis.

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Article
· Jun 30, 2022 8m read
What's new in Angular 14

Hi! My name is Sergei Sarkisian and I’m creating Angular frontend for more than 7 years working in InterSystems. As the Angular is very popular framework, our developers, customers and partners often choose it as part of the stack for their applications.

I would like to start series of articles which will cover different aspects of Angular: concepts, how-to, best practices, advanced topics and more. This series will target people who already familiar with Angular and wouldn’t cover basic concepts. As I’m in the process of building articles roadmap, I would like to begin with highlighting some important features in most recent Angular release.

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If you are using Python, you can use the built-in venv module to create a virtual environment. This module is the recommended way to create and manage virtual environments.

A virtual environment is a tool that helps to keep dependencies required by different projects separate by creating isolated python virtual environments for them. It solves the “Project X depends on version 1.x but, Project Y needs 4.x” dilemma, and keeps your global site-packages directory clean and manageable.

So if like me you work a lot with Python, you can use the venv module to create a virtual environment for your project. This will allow you to install packages without affecting the global Python installation.

You will find here two neat alias to create and activate a virtual environment.

Python aliases

alias venv="python3 -m venv .venv; source .venv/bin/activate"
alias irisvenv="python3 -m venv .venv; source .venv/bin/activate; pip install https://github.com/grongierisc/iris-embedded-python-wrapper/releases/download/v0.0.3/iris-0.0.3-py3-none-any.whl"

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Article
· Nov 29, 2022 6m read
What's HL7v2?!

HL7 (Health Level 7) is a set of technical specifications for computerized exchanges of clinical, financial and administrative data between hospital information systems (HIS). These specifications are variously integrated into the corpus of formal American (ANSI) and international (ISO) standards.

The L7 of HL7 indicates that it is a standard that operates at layer 7, in other words at the application layer, of the OSI model. This means that HL7 does not have to take into account exchange security considerations, or those of message transport (this being ensured by lower-level layers such as SSL/TLS for security or TCP for the transport of data for example). To be more precise, layer 7 supports communications for end-user processes and applications and the presentation of data for user-facing software applications. As the highest layer of the OSI model, and the closest to the end user, layer 7 provides application-specific functions such as identifying communication partners and the quality of service between them, determining resource availability, considering privacy and user authentication, and synchronizing communication, as well as connecting the application to the lower levels of the OSI model.

Returning to the HL7 standard, the HL7 version 2 standard (also known as Pipehat) was originally created in 1989 but is still being used and updated regularly, resulting in versions 2.1, 2.2, 2.3, 2.3.1, 2.4, 2.5, 2.5.1, 2.6, 2.7, 2.7.1, 2.8, 2.8.1, 2.8.2 and 2.9. The v2.x standards are backward compatible (e.g., a message based on version 2.3 will be understood by an application that supports version 2.6) and in higher versions, you will see some fields are left just for it.

Despite it being more than 30 years old, HL7v2 remains the most widely used healthcare interface standard by a large margin according to the HL7.org portal that tells that:

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