Presenter: Randy Pallotta
Task: Automatically create cohorts of high-risk patients. Send them critical action alerts
Approach: Use the new HealthShare features: “Smart Programs” and “Advanced Clinical Notifications”

In this session, we will cover HealthShare "Smart Programs" and "Advanced Clinical Notifications" which allow you to automatically create cohorts of high risk patients in Health Insight and Information Exchange and to send critical actionable alerts. After this session, you should understand this new feature and how to configure a new program or alert.

Content related to this session, including slides, video and additional learning content can be found here. Please note that this content is available only to HealthShare customers and attendees of the Global Summit. On the learning web site you will be prompted for your Global Summit credentials to access this content.

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Background

In 2021, I participated as an InterSystems mentor in a hackathon, where a newcomer to FHIR asked me if there was a tool to transform generic JSON data containing basic patient information into FHIR format. I informed her that I didn't know anything like that, unfortunately.

But that idea stays in my mind...

Several months later, in 2022, I came up with an idea to experiment: to train a named entity recognition (NER) to identify FHIR elements into generic texts. The training involved synthetic FHIR data generated by Synthea and the spaCy Python library.

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Windows Subsystem for Linux (WSL) is a feature of Windows that allows you to run a Linux environment on your Windows machine, without the need for a separate virtual machine or dual booting.

WSL is designed to provide a seamless and productive experience for developers who want to use both Windows and Linux at the same time**.

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This week I was able to demo a proof of concept for our FMS interface on traffic cop architecture to my team. We are working on modernizing an Interoperability production running on mirrored Health Connect instances. We deploy IRIS workloads on Red Hat OpenShift Container Platform using InterSystems Kubernetes Operator (IKO). We can define any number of replicas for the compute stateful set where each compute pod runs our Interoperability production. We introduced Horizontal Pod Autoscaler (HPA) to scale up the number of compute pods based on memory or CPU utilization.

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Article
· Feb 2, 2016 1m read
Cache' databases as UNIX sparse files

Some third party backup products may by default restore CACHE.DAT files as UNIX sparse files when there are trailing zeroes in the backup file.

The support for sparse files vary from UNIX distribution and file system types. Sparse files attempt to use file system space more efficiently when blocks allocated to the file are mostly empty similar to thin-provisioned storage. The file system transparently converts metadata representing empty blocks into "real" blocks filled with zero bytes at runtime. The application is suppose to be unaware of this conversion.

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Some time ago I developed an application that tackled a familarial problem faced by many developers when required to update multiple UAT or PRODUCTION sites with the latest Software patches that have been developed and tested on your DEV server and now need to be deployed to multiple sites running that software.

In principle the solution works as follows:

1) Prepare an XML export of affected classes/routines/csp pages/hl7 definitions et al

2) Optionally create a global export of any new globals or changes to existing globals

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Article
· Mar 24, 2020 2m read
BlocksExplorer map generator

I hope you already know one of my projects Cache Blocks Explorer. I've recently renamed it to Blocks Explorer.

For the recent contest, I've added a new feature, the ability to generate a static picture of any Cache or IRIS database. Like below. Where unique globals have a unique color. This is how looks like inside 9.5GB database. Where 1 pixel represents one block. By link on image you will get even bigger image, with more detalization.

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Kidney Disease can be discovered from some parameters well known to the medical community. In this way, in order to help the medical community and computerized systems, especially AI, the scientist Akshay Singh published a very useful dataset for training ML algorithms in the detection/prediction of kidney disease. This publication can be found on the largest and best known data repository for ML, Kaggle at https://www.kaggle.com/datasets/akshayksingh/kidney-disease-dataset.

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Introduction

This is a quickstart guide to IRIS for Linux systems administrators who need to be able to support the IRIS DB as well as other normal infrastructure tasks.

IRIS is a DB system from Intersystems. An IRIS DB can hold code (in the form of a Class) or data (in the form of Globals). IRIS DB are Linux files called IRIS.DAT.

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In the vibrant landscape of the InterSystems Developer Community, there are individuals whose presence resonates deeply, leaving an indelible mark on the community's ethos and evolution. One such stalwart is @Robert Cemper, a seasoned member whose journey with InterSystems company and the Developer Community spans a remarkable timeline, rich with experiences, milestones, and invaluable contributions.

🤩 Let's take a closer look at Robert's journey with InterSystems technology and our Developer Community...

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Article
· Apr 8, 2019 4m read
Should we use computers?

The titular question was quite relevant and often discussed some thirty years ago. The thought went: “Sure, there are industries where computers are the norm, but in my industry we got just fine so far, the benefits are questionable, problems innumerable and unsolved. Can we continue as before or should we embrace this new technology?”

Today, everyone asks the same question but about Machine Learning and Artificial Intelligence. The doubts are the same – lack of expertise, lack of known path, perceived irrelevancy to the industry.

Yet, as before, the correct, even the only possible answer is a resounding yes. Read on to find out why.

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Hi Developers!!,

I know what you are thinking... a new feature for ZEN.proxyObject...? NOW..???

In Spain we say that better late than never ;-)

Have you ever need to send a numeric attribue of a Json in String format?

Did you go crazy casting class objects with fixed typed properties?

Lucky you!!

With this new feature I propose a way to continue working with our loved dynamic object %ZEN.proxyObject, being able to choose whether or not we want to send numeric attributes in String format.

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Article
· Mar 15, 2016 1m read
Code metrics over time

Among the outputs of our Yuzinji tool are two code metrics that it can be interesting to track over time as a development project proceeds. These are Size and XS. The first is fairly straightforward. As you write more code the size of your codebase increases. The XS metric (pronounced "excess") aims to quantify excessive structural complexity.

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The pandemic that struck the world in 2020 made everyone follow the news and the numbers that involve the COVID-19.

Why don’t you take that opportunity to create something simple and pleasant, to follow the number of vaccinations worldwide?

To face this challenge, I'm using the data provided by Our World in Data - Research and data to make progress against the world’s largest problems.

They have a dedicated repository on Github with the data of COVID-19, and I took the vaccination data to help me with my tracker.

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Hello Community,

Some of you have passed the InterSystems Official Certification and would like to get a nifty green tick on your profile avatar

and all your certificates in your DC profile so that others know that you know... you know what we mean

So, to add certification to your DC profile, you need to take 3 easy steps:

1️⃣ Go to your DC profile

2️⃣ Go to the InterSystems Certification section

3️⃣ Click on the Load my certification(s) button

and that's it!

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Hi Developers!

Another way to start using InterSystems ObjectScript Package Manager is to use prebuilt container images of InterSystems IRIS Community Edition and InterSystems IRIS for Health Community Edition.

We deploy this IRIS images on DockerHub and you can run it with the following command:

docker run --rm -p 52773:52773 --init --name my-iris -d intersystemsdc/iris-community:2019.4.0.383.0-zpm

Launch a terminal with:

docker exec -it my-iris iris session IRIS

And install zpm-module as:

USER>zpm 

zpm: USER>install objectscript-math

[objectscript-math] Reload START

[objectscript-math] Reload SUCCESS

[objectscript-math] Module object refreshed.

[objectscript-math] Validate START

[objectscript-math] Validate SUCCESS

[objectscript-math] Compile START

[objectscript-math] Compile SUCCESS

[objectscript-math] Activate START

[objectscript-math] Configure START

[objectscript-math] Configure SUCCESS

[objectscript-math] Activate SUCCESS

zpm: USER>

And use same commands for InterSystems IRIS for Health using the tag: intersystemsdc/irishealth-community:2019.4.0.383.0-zpm

The images are being published on IRIS Community Edition and IRIS Community Edition for Health repositories of Docker Hub.

We will update tags with every new release of IRIS and ZPM.

Happy coding!

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Article
· Jul 7, 2023 8m read
Iris FHIR Python Strategy

Description

With InterSystems IRIS FHIR Server you can build a Strategy to customize the behavior of the server (see documentation for more details).

Image

This repository contains a Python Strategy that can be used as a starting point to build your own Strategy in python.

This demo strategy provides the following features:

  • Update the capability statement to remove the Account resource
  • Simulate a consent management system to allow or not access to the Observation resource
    • If the User has sufficient rights, the Observation resource is returned
    • Otherwise, the Observation resource is not returned
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InterSystems FAQ rubric

To remove InterSystems products installed on your Windows system, use Add or Remove Programs in Control Panel (in Windows 10, select Apps from Windows Settings).

Since we will be making changes to the system, you will need to log in as a user with administrator privileges.

1) Log in to the system as an administrator.

2) From the system tray, exit the launcher of the InterSystems product instance you want to uninstall (click launcher → exit).

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Article
· Jan 28, 2022 2m read
Embedded SQL Bug and Workaround

We recently encountered an Embedded SQL issue while upgrading to IRIS 2021.1, and thought the issue and workaround might be interesting to share.

Key takeaway: Host variables in an ORDER BY clause of an embedded SQL query that is inside of a method don't work as expected. IRIS versions starting with 2020.1 are affected. As a workaround, add the host variable to the Method's PublicList list and "new" them so the embedded query has access to them.

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Hello developers,

In this article, I'll show you how to run code at compile time with ObjectScript macros.

Here's a use case that recently led me to use this feature:

As part of a medical application developed for more than 20 years, we have a large number of parameters. Although we have procedures for documenting these settings, it can be helpful to have a quick view of which settings are actually used by the application code.

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