#Python

I am writing this post primarily to gather an informal consensus on how developers are using Python in conjunction with IRIS, so please respond to the poll at the end of this article! In the body of the article, I'll give some background on each choice provided, as well as the advantages for each, but feel free to skim over it and just respond to the poll.

INTRO

I'm having trouble installing IntegratedML in an IRIS 2025.1 container, which I need for a demo. I tried running the following command:

python3 -m pip install --index-url https://registry.intersystems.com/pypi/simple --no-cache-dir --target /usr/irissys/mgr/python intersystems-iris-automl

Unfortunately I get the following error:

If you're migrating from Oracle to InterSystems IRIS—like many of my customers—you may run into Oracle-specific SQL patterns that need translation.

Take this example:

SELECT (TO_DATE('2023-05-12','YYYY-MM-DD') - LEVEL + 1) AS gap_date
FROM dual
CONNECT BY LEVEL <= (TO_DATE('2023-05-12','YYYY-MM-DD') - TO_DATE('2023-05-02','YYYY-MM-DD') + 1);

In Oracle:

For a long time I have wanted to learn the Django framework, but another more pressing project has always taken priority. Like many developers, I use python when it comes to machine learning, but when I first learned web programming PHP was still enjoying primacy, and so when it was time for me to pick up a new complicated framework for creating web applications to publish my machine learning work, I still turned to PHP.

Are you using Jupyter Notebooks with IRIS? Are you using the vscode-iris-jupyter-server VS Code extension for your notebooking? If so, please let me know either via direct message or with a comment on this post. I'd like to hear more about how our customers are working with tool specifically, and with data science more generally.

Thanks!

Hi Guys,

I'm a newbie running IRIS in a container (IRIS for UNIX (Ubuntu Server LTS for x86-64 Containers) 2024.3 (Build 217U) Thu Nov 14 2024 17:30:43 EST) and trying to setup Python so I can start working on ML & Autosklearn,my understanding is that IRIS already comes with embedded Python but unable to do something like "import pandas as pd" in VSCode which looks like I need install a more complete version of Python or packages, so what I'm missing?

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Hi, Community!

🐍Great news—you can now use Python to customize your productions and add custom code!

Using Embedded Python in the BPL and DTL Editors

https://www.youtube.com/embed/D58dvcDQ-WY?utm_source=youtube&utm_medium=social&utm_campaign=D58dvcDQ-WY
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I am brand new to using AI. I downloaded some medical visit progress notes from my Patient Portal. I extracted text from PDF files. I found a YouTube video that showed how to extract metadata using an OpenAI query / prompt such as this one:

ollama-ai-iris/data/prompts/medical_progress_notes_prompt.txt at main · oliverwilms/ollama-ai-iris

I cloned iris-rag-demo from Open Exchange and issued docker-compose up -d. I went to the front end and type in the chat message:

Who was the 46th President of United States of America?

I got a run time error:

RuntimeError: ERROR <Ens>ErrBPTerminated: Terminating BP ChatProcess # due to error: ERROR #5002: ObjectScript error: <PYTHON EXCEPTION> *<class 'RuntimeError'>: <PYTHON EXCEPTION> <class 'ValueError' > ERROR #5002: ObjectScript error: <PYTHON EXCEPTION> *<class 'RuntimeError'

Traceback:

I know that people who are completely new to VS Code, Git, Docker, FHIR, and other tools can sometimes struggle with setting up the environment. So I decided to write an article that walks through the entire setup process step by step to make it easier to get started.

I’d really appreciate it if you could leave a comment at the end - let me know if the instructions were clear, if anything was missing, or if there’s anything else you'd find helpful.

The setup includes:

✅ VS Code – Code editor
✅ Git – Version control system
✅ Docker – Runs an instance of IRIS for Health Community
✅ VS Code REST Client Extension – For running FHIR API queries
✅ Python – For writing FHIR-based scripts
✅ Jupyter Notebooks – For AI and FHIR assignments

Before you begin: Ensure you have administrator privileges on your system.

In addition to reading the guide, you can also follow the steps in the videos:

For Windows

https://www.youtube.com/embed/IyvuHbxCwCY
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An experiment on how to use the LangChain framework, IRIS Vector Search, and LLMs to generate IRIS-compatible SQL from user prompts.

This article was based in this notebook. You can run it with a ready to use environment with this application in OpenExchange.

Setup

First, we need to install the necessary libraries:

I'm exploring this right now: given a bunch of types defined as Pydantic models, how can I come up with an equivalent %RegisteredObject/%SerialObject and convert to/from (e.g., to support persistence and match validation as much as possible)?

People who know Python better than I do (e.g., your average undergraduate from this decade): is this a stupid idea or a cool idea? Has anyone else done this before?