Article
· Mar 24 8m read
Python BPL in preview

BPL from 10,000 feet

BPL stands for Business Process Language.
This is an XML format for describing complex information orchestration interactions between systems.
InterSystems Integration engine has for two decades, provided a visual designer to build, configure, and maintain, BPL using a graphical interface.
Think of it like drawing a process flow diagram that can be compiled and deployed.

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Pandas is not just a popular software library. It is a cornerstone in the Python data analysis landscape. Renowned for its simplicity and power, it offers a variety of data structures and functions that are instrumental in transforming the complexity of data preparation and analysis into a more manageable form. It is particularly relevant in such specialized environments as ObjectScript for Key Performance Indicators (KPIs) and reporting, especially within the framework of the InterSystems IRIS platform, a leading data management and analysis solution.

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A customer recently asked if IRIS supported OpenTelemetry as they where seeking to measure the time that IRIS implemented SOAP Services take to complete. The customer already has several other technologies that support OpenTelemetry for process tracing. At this time, InterSystems IRIS (IRIS) do not natively support OpenTelemetry.

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Introduction

As the health interoperability landscape expands to include data exchange across on-premise as well as hosted solutions, we are seeing an increased need to integrate with services such as cloud storage. One of the most prolifically used and well supported tools is the NoSQL database DynamoDB (Dynamo), provided by Amazon Web Services (AWS).

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The objective of the article is to provide the reader with the following informations:

  • Configure and use the FHIR server
  • Create an OAuth2 Authorization Server
  • Bind the FHIR server to the OAuth2 Authorization Server for support of SMART on FHIR
  • Use the interoperability capabilities of IRIS for Health to filter FHIR resources
  • Create a custom operation on the FHIR server

Schema of the article:

Schema

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If you are a customer of the new InterSystems IRIS® Cloud SQL and InterSystems IRIS® Cloud IntegratedML® cloud offerings and want access to the metrics of your deployments and send them to your own Observability platform, here is a quick and dirty way to get it done by sending the metrics to Google Cloud Platform Monitoring (formerly StackDriver).

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Introduction

Not so long ago, I came across the idea of using Python Class Definition Syntax to create IRIS classes on the InterSystems Ideas Portal. It caught my attention since integrating as many syntaxes as possible gives visibility to InterSystems’s products for programmers with experience in many languages.

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Hello Community,

SQL language remains the most practical way to retrieve information stored in a database.

The JSON format is very often used in data exchange.

It is therefore common to seek to obtain data in JSON format from SQL queries.

Below you will find simple examples that can help you meet this need using ObjectScript and Python code.

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Django, a high-level web framework written in Python, has become a staple for developers seeking a robust, efficient, and easy-to-learn solution for building web applications. Its popularity stems from its versatility, offering developers an efficient toolkit for building web applications. Integrating Django with InterSystems IRIS introduces a dynamic synergy, providing developers with a comprehensive web development and database management solution. That's why on the Ideas Portal, @Evgeny Shvarov suggested that having Examples to work with IRIS from Django would be beneficial. In this article, we'll explore two projects created to answer the posted idea — Django-iris by @Dmitry Maslennikov and Iris-size-django by @Heloisa Paiva.

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We have a yummy dataset with recipes written by multiple Reddit users, however most of the information is free text as the title or description of a post. Let's find out how we can very easily load the dataset, extract some features and analyze it using features from OpenAI large language model within Embedded Python and the Langchain framework.

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I have challenged to create a bot application using Azure Bot that can retrieve and post data to IRIS for Health.

A patient's data has already been registered in the FHIR repository of IRIS for Health.

The patient's MRN is 1001. His name is Taro Yamada. (in Japanese :山田 太郎)

This bot can post new pulse oximeter readings as an observation resource linked to the patient.

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Hi, Community!

Since this article is an overview of Flask Login, let's begin with Flask Introduction!

What is Flask?

In the realm of web development, Python has emerged as a formidable force, offering its versatility and robustness to create dynamic and scalable applications. For that reason, tools and services compatible with this language are in demand these days. Flask is a lightweight and easy-to-use web framework for Python. It stands out as a lightweight and user-friendly option. Its simplicity and flexibility have made it a popular choice for developers, particularly for creating smaller-scale applications. It is based on the Werkzeug toolkit and provides a simple but powerful API for building web applications.
Unlike its full-stack counterparts, Flask provides a core set of features, focusing on URL routing, template rendering, and request handling. This minimalist approach makes Flask lightweight and easy to learn, allowing developers to build web applications quickly and without the burden of unnecessary complexity.

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It seems like yesterday when we did a small project in Java to test the performance of IRIS, PostgreSQL and MySQL (you can review the article we wrote back in June at the end of this article). If you remember, IRIS was superior to PostgreSQL and clearly superior to MySQL in insertions, with no big difference in queries.

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Here you'll find a simple program that uses Python in an IRIS environment and another simple program that uses ObjectScript in a Python environment. Also, I'd like to share a few of the troubles I went trough while learning to implement this.

Python in IRIS environment

Let's say, for example, you're in an IRIS environment and you want to solve a problem that you find easy, or more efficient with Python.

You can simply change the environment: create your method as any other, and in the end of it's name and specifications, you add [ Language = python ]:

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1. IRIS RAG Demo

IRIS RAG Demo

This demo showcases the powerful synergy between IRIS Vector Search and RAG (Retrieval Augmented Generation), providing a cutting-edge approach to interacting with documents through a conversational interface. Utilizing InterSystems IRIS's newly introduced Vector Search capabilities, this application sets a new standard for retrieving and generating information based on a knowledge base.
The backend, crafted in Python and leveraging the prowess of IRIS and IoP, the LLM model is orca-mini and served by the ollama server.
The frontend is an chatbot written with Streamlit.

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Case description

Let’s imagine that you are a Python developer or have a well-trained team specialized in Python, but the deadline you got to analyze some data in IRIS is tight. Of course, InterSystems offers many tools for all kinds of analyses and treatments. However, in the given scenario, it is better to get the job done using the good old Pandas and leave the IRIS for another time.

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Hi, Community!

This article is an overview of SQLAlchemy, so let's begin!

SQLAlchemy is the Python SQL toolkit that serves as a bridge between your Python code and the relational database system of your choice. Created by Michael Bayer, it is currently available as an open-source library under the MIT License. SQLAlchemy supports a wide range of database systems, including PostgreSQL, MySQL, SQLite, Oracle, and Microsoft SQL Server, making it versatile and adaptable to different project requirements.

The SQLAlchemy SQL Toolkit and Object Relational Mapper from a comprehensive set of tools for working with databases and Python. It has several distinct areas of functionality which you can use individually or in various combinations. The major components are illustrated below, with component dependencies organized into layers:

_images/sqla_arch_small.png

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While starting the development with IRIS we have a distribution kit or in case of Docker we are pulling the docker image and then often we need to initialize it and setup the development environment. We might need to create databases, namespaces, turn on/off some services, create resources. We often need to import code and data into IRIS instance and run some custom code to init the solution.

Lajos Simicska declares war on Viktor Orban: "It's either him or me!" - The  Budapest Beacon

And there plenty of templates on Open Exchange where we suggest how to init REST, Interoperability, Analytics, Fullstack and many other templates with ObjectScript. What if we want to use only Python to setup the development environment for Embedded Python project with IRIS?

So, the recent release of Embedded Python template is the pure python boilerplate that could be a starting point for developers that build python projects with no need to use and learn ObjectScript. This article expresses how this template could be used to initialize IRIS. Here we go!

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Article
· Nov 24, 2023 4m read
A framework yes, but a suitable framework

How can IRIS productions be deployed more quickly and with greater peace of mind?

The aim of interoperability productions is to enable you to connect systems in order to transform and route messages between them. To connect systems, you develop, configure, deploy and manage productions that integrate several software systems.

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Why should you connect Flask to InterSystems IRIS?

The first thing that comes to mind when we think about combining Flask with IRIS is a portal to interact with your clients and partners. A good example would be a website for patients to access their clinical exams. Of course, this case would require a whole new layer of security, which we did not cover in our last article. However, we can effortlessly add it with Werkzeug, for instance.

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Index

Part 1

  • Introducing Flask: a quick review of the Flask Docs, where you will find all the information you need for this tutorial;
  • Connecting to InterSystems IRIS: a detailed step-by-step of how to use SQLAlchemy to connect to an IRIS instance;

Part 2

  • A discussion about this kind of implementation: why we should use it and situations where it is applicable.
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Article
· Jun 12, 2023 3m read
LangChain fixed the SQL for me

This article is a simple quick starter (what I did was) with SqlDatabaseChain.

Hope this ignites some interest.

Many thanks to:

sqlalchemy-iris author @Dmitry Maslennikov

Your project made this possible today.

The article script uses openai API so caution not to share table information and records externally, that you didn't intend to.

A local model could be plugged in , instead if needed.

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For the upcoming Python contest, I would like to make a small demo, on how to create a simple REST application using Python, which will use IRIS as a database. Using this tools

  • FastAPI framework, high performance, easy to learn, fast to code, ready for production
  • SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that gives application developers the full power and flexibility of SQL
  • Alembic is a lightweight database migration tool for usage with the SQLAlchemy Database Toolkit for Python.
  • Uvicorn is an ASGI web server implementation for Python.

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