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#Python

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Python is an interpreted high-level programming language for general-purpose programming. Created by Guido van Rossum and first released in 1991, Python has a design philosophy that emphasizes code readability, notably using significant whitespace

Official site.

InterSystems Python Binding Documentation.

In article

https://community.intersystems.com/print/518106

Traceback (most recent call last):
File "c:\Users\rochesterd\PythonScripts\fhir_stuff\fhir-client-python-main\fhir-client-python-main\src\client.py", line 57, in <module>
patient0 = Patient.parse_obj(patients_resources.search(
AttributeError: 'NoneType' object has no attribute 'serialize'

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Hi Community,

This article is a continuation of my article about Getting to know Python Flask Web Framework

In this article, we will cover the basics of topics listed below:

1. Routing in Flask Framework
2. Folder structure for a Flask app (Static and Template)
3. Getting and displaying data in the Flask application from IRIS.

So, let's begin.

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Schematron is a rule-based validation language for making assertions about the presence or absence of certain patterns in XML documents. A schematron refers to a collection of one or more rules containing tests. Schematrons are written in a form of XML, making them relatively easy for everyone, even non-programmers, to inspect, understand, and write

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So, I know that I can return a SQL Error message from my SQL Procedure written in ObjectScript, with code like this

$ cat <<EOF | irissqlcli iris://_SYSTEM:SYS@localhost:1972/USER
CREATE or REPLACE PROCEDURE test()
LANGUAGE OBJECTSCRIPT
{
 SET %sqlcontext.%SQLCODE = 400
 SET %sqlcontext.%ROWCOUNT = -1
 SET %sqlcontext.%Message = "test error message"
};

CALL test();

EOF
[SQLCODE: <-400>:<Fatal error occurred>]
[Location: <SPFunction>]
[%msg: <test error message>]

But I did not find how to do it with Python. I can't find %sqlcontext variable available there

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Python has become the most used programming language in the world (source: https://www.tiobe.com/tiobe-index/) and SQL continues to lead the way as a database language. Wouldn't it be great for Python and SQL to work together to deliver new functionality that SQL alone cannot? After all, Python has more than 380,000 published libraries (source: https://pypi.org/) with very interesting capabilities to extend your SQL queries within Python.

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Article
· Dec 6, 2022 3m read
OCR DEMO

OCR DEMO

This is a demo of the OCR functionality of the pero-ocr library.

It used in the iris application server in python.

Demo

This is an example of input data :

input

This is the result of the OCR :

In this example you have the following information:

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I have table

CREATE TABLE nodes (
        name VARCHAR(50) NOT NULL, 
        parent VARCHAR(50), 
        PRIMARY KEY (name), 
        FOREIGN KEY(parent) REFERENCES nodes (name) ON UPDATE cascade
);

I put some data

INSERT INTO nodes (name, parent) VALUES ('n1', NULL);
INSERT INTO nodes (name, parent) VALUES ('n11', 'n1');
INSERT INTO nodes (name, parent) VALUES ('n12', 'n1');
INSERT INTO nodes (name, parent) VALUES ('n13', 'n1');

Let's delete all

DELETE FROM nodes;

Nope, no way.

SQL Error [124] [S1000]: [SQLCODE: <-124>:<FOREIGN KEY constraint failed referential check upon DELETE of row in referenced table>]
[Location: <ServerLoop>]
[%msg: <At least 1 Row exists in table 'SQLUser.nodes' which references key 'NODESPKey2' - Foreign Key Constraint 'NODESFKey3', Field(s) 'parent' failed on referential action of NO ACTION>]

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I have a table, with autoincremented id

CREATE TABLE users (
    id SERIAL NOT NULL,
    name VARCHAR(30) NOT NULL,
    PRIMARY KEY (id)
)

I can add a new item there with an explicit id 

INSERT INTO users (id, name) VALUES (2, 'fred')

And while my id is autoincremented, I can omit it

INSERT INTO users (name) VALUES ('ed')

So, this time, I don't know the id, and I want to somehow get it.

I could do it with LAST_IDENTITY() function, but it just uses %RowID, and have no relation to the primary id

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Hi Developers,

Enjoy watching the new video on InterSystems Developers YouTube:

⏯ Using Python with InterSystems IRIS @ Global Summit 2022

https://www.youtube.com/embed/CQqXkuWkHiY
[This is an embedded link, but you cannot view embedded content directly on the site because you have declined the cookies necessary to access it. To view embedded content, you would need to accept all cookies in your Cookies Settings]

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Hello everyone, this is with great pleasure that I announce the V2 of my application 'Contest-FHIR'.

In this new version, I used new tools and techniques I discovered at the EUROPEAN HEALTHCARE HACKATHON in which I was invited by InterSystems as a guest and as a mentor to display the multiple projects I did in my intership back in April 2022.

Today I present to you the V2 of my application, it can now transform CSV to FHIR to SQL to JUPYTER notebook.

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Article
· Nov 27, 2022 9m read
Easy CSV TO FHIR - InterSystems Contest

Hello everyone, I’m a French student in academical exchange for my fifth year of engineering school and here is my participation in the FHIR for Women's Health contest.

This project is supposed to be seen as the backend of a bigger application. It can be plugged into a Front End app and help you gather information from your patients. It will read your data in local and use a Data Transformation to make it into a FHIR object before sending it to the included local FHIR server.

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This is not an issue in ObjectScript, due to its typeless nature. But it's essential for external programming languages that care a bit more about types of variables.

And in any case, it's still reproducible in ObjectScript. I have table

CREATE TABLE some_table (
        id INTEGER NOT NULL, 
        x INTEGER, 
        y INTEGER, 
        z VARCHAR(50), 
        PRIMARY KEY (id)
)

And data

INSERT INTO some_table (id, x, y, z) VALUES (1, 1, 2, 'z1');
INSERT INTO some_table (id, x, y, z) VALUES (2, 2, 3, 'z2');
INSERT INTO some_table (id, x, y, z) VALUES (3, 3, 4, 'z3');
INSERT INTO some_table (id, x, y, z) VALUES (4, 4, 5, 'z4');

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I am demonstrating a use case of how we can create an IRIS Interoperability Production for special use in an external language. InterSystems IRIS, within Interoperability has a framework called Production Extension (PEX), using which we can create productions and program them as per their purpose using external languages like Java, Python etc, and also develop custom inbound and outbound adapters to communicate with other applications.

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Hi Community,


In this article, I will introduce Python Flask Web Framework. Together we will create a minimal web application to connect to IRIS and get data from it.

Below you can find the steps we will need to follow:

  • Step 1 : Introduction to Python Flask Web Framework
  • Step 2 : Installation of Flask module
  • Step 3 : Creation of web application using Flask
  • Step 4 : Use of HTML Templates
  • Step 5 : Installation of IRIS Python Native module
  • Step 6 : Establishment of a connection with IRIS
  • Step 7 : Transferring data from IRIS to Flask and displaying it

So Let's start with step 1

Step1-Introduction to Python Flask Web Framework

Flask is a small and lightweight Python web framework that provides useful tools and features that make creating web applications in Python easier. It gives developers flexibility and is a more accessible framework for new developers since it allows to build a web application quickly using only a single Python file. Flask is also extensible and doesn’t requires a particular directory structure or complicated boilerplate code before getting started.


For more details please view Flask Documentations

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Hello everyone, I’m a French student that just arrived in Prague for an academical exchange for my fifth year of engineering school and here is my participation in the interop contest.

I hadn’t much time to code since I was moving from France to Prague and I’m participating alone, so I decided to make a project that’s more like a template rather than an application.

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I'm after some more in-depth information about how the embedded python is implemented with regards to how it works when a python method is called from a CSP page. Will it run in the same Windows process? Will there be any issues with multitasking (considering python doesn't seem very good at this)?

Also, is there a performance penalty to pay for running embedded python vs "using IRIS APIs from Python".

Another question is what python interpreter the embedded python is using? Is it an Intersystems one or the regular c.python? Version?

Excited to go Python!

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1. Integrated ML Demonstration

This repository is a demonstration of IntegratedML and Embedded Python.

SideBySidePythonAndCos

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