Hi Community,


In this article, I will introduce Python Flask Web Framework. Together we will create a minimal web application to connect to IRIS and get data from it.

Below you can find the steps we will need to follow:

  • Step 1 : Introduction to Python Flask Web Framework
  • Step 2 : Installation of Flask module
  • Step 3 : Creation of web application using Flask
  • Step 4 : Use of HTML Templates
  • Step 5 : Installation of IRIS Python Native module
  • Step 6 : Establishment of a connection with IRIS
  • Step 7 : Transferring data from IRIS to Flask and displaying it

So Let's start with step 1

Step1-Introduction to Python Flask Web Framework

Flask is a small and lightweight Python web framework that provides useful tools and features that make creating web applications in Python easier. It gives developers flexibility and is a more accessible framework for new developers since it allows to build a web application quickly using only a single Python file. Flask is also extensible and doesn’t requires a particular directory structure or complicated boilerplate code before getting started.


For more details please view Flask Documentations

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Hello everyone, I’m a French student that just arrived in Prague for an academical exchange for my fifth year of engineering school and here is my participation in the interop contest.

I hadn’t much time to code since I was moving from France to Prague and I’m participating alone, so I decided to make a project that’s more like a template rather than an application.

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In this GitHub we gather information from a csv, use a DataTransformation to make it into a FHIR object and then, save that information to a FHIR server all that using only Python.

The objective is to show how easy it is to manipulate data into the output we want, here a FHIR Bundle, in the IRIS full Python framework.

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In this GitHub we fine tune a bert model from HuggingFace on review data like Yelp reviews.

The objective of this GitHub is to simulate a simple use case of Machine Learning in IRIS :
We have an IRIS Operation that, on command, can fetch data from the IRIS DataBase to train an existing model in local, then if the new model is better, the user can override the old one with the new one.
That way, every x days, if the DataBase has been extended by the users for example, you can train the model on the new data or on all the data and choose to keep or let go this new model.

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Article
· Jul 30, 2022 5m read
Introduction to Django part 3

Continuing to observe the possibilities of Django, and usage with IRIS. The first we have looked how to define models and connect to tables already existing in IRIS, than we extended embedded Django Administration portal, with an ability to see what data we have in that models, with filters, editing and even pagination.

Time to go to real action, now we a going to create some REST API, on Django, based on the same data, we used before from the package posts-and-tags.

To do so, we will use Django REST Framework

Django REST Framework

Django REST framework is a powerful and flexible toolkit for building Web APIs.

Some reasons you might want to use REST framework:

  • The Web browsable API is a huge usability win for your developers.
  • Authentication policies including packages for OAuth1a and OAuth2.
  • Serialization that supports both ORM and non-ORM data sources.
  • Customizable all the way down - just use regular function-based views if you don't need the more powerful features.
  • Extensive documentation, and great community support.
  • Used and trusted by internationally recognised companies including Mozilla, Red Hat, Heroku, and Eventbrite.

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Article
· Jul 25, 2022 8m read
Introduction to Django part 2

In the first part, I've shown how to start a new project on Django, as well as define new models and add already existing models.

This time, I'll introduce an admin panel, available out of the box and how it can be useful.

Important note: do not expect that if you try to repeat actions from this post it will work for you, it does not. During the article, I had to do some fixes in the django-iris project, and even in DB-API driver made by InterSystems to fix some issues there as well, and I think this driver is still in development, and we will get more stable driver in future. Let's decide that this article only explains how it could be if we would have all done.

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In this article, I am trying to identify the multiple areas to develop the features we can able to do using python and machine learning.

Each hospital is every moment trying to improve its quality of service and efficiency using technology and services.

The healthcare sector is one of the very big and vast areas of service options available and python is one of the best technology for doing machine learning.

In every hospital, humans will come with some feelings, if this feeling will understand using technology is make a chance to provide better service.

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Following this GitHub we will see how the FIX protocol can be implemented easily using IRIS and Python.

If you don't have much time focus on the Send a Quote before the Order part near the end, as it will, in a matter of minute, tell you how to send a Quote Request followed by an Order Request and show you the result from the server, and that in no more than five clicks.

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ObjectScript Kernel Logo
Jupyter Notebook is an interactive environment consisting of cells that allow executing code in a great number of different markup and programming languages.

To do this Jupyter has to connect to an appropriate kernel. There was no ObjectScript Kernel, that is why I decided to create one.

You can try it out here.

Here's a sneak peek of the results:

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InterSystems Native SDK for Python is a lightweight interface to InterSystems IRIS APIs that were once available only through ObjectScript.

I'm especially interested in the ability to call ObjectScript methods, class methods, to be precise. It works, and it works great, but by default, calls only support scalar arguments: strings, booleans, integers, and floats.

But if you want to:
- Pass or return structures, such as dicts or lists
- Pass or return streams

You'll need to write some glue code or take this project (installs with pip install edpy). edpy package gives you one simple signature:

call(iris, class_name, method_name, args)

which allows you to call any ObjectScript method and get results back.

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This formation, accessible on my GitHub, will cover, in half a hour, how to read and write in csv and txt files, insert and get inside the IRIS database and a distant database using Postgres or how to use a FLASK API, all of that using the Interoperability framework using ONLY Python following the PEP8 convention.

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Article
· Apr 5, 2022 4m read
Serializing Python objects in globals

Motivation

This project was thought of when I was thinking of how to let Python code deal naturally with the scalable storage and efficient retrieving mechanism given by IRIS globals, through Embedded Python.

My initial idea was to create a kind of Python dictionary implementation using globals, but soon I realized that I should deal with object abstraction first.

So, I started creating some Python classes that could wrap Python objects, storing and retrieving their data in globals, i.e., serializing and deserializing Python objects in IRIS globals.

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Article
· Feb 27, 2022 2m read
Dash-Python-IRIS

We are happy to share interesting information with you, as well as tell you why Python is good, where it is used.

Among the most used libraries are NumPy and Pandas. NumPy (Numerical Python) is used to sort large datasets. It simplifies mathematical operations and their vectorization on arrays. Pandas offers two data structures: Series (a list of elements) and Data Frames (a table with multiple columns). This library converts data into a Data Frame, allowing you to remove and add new columns, as well as perform various operations.

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Hi Community,

This post is a introduction of my openexchange iris-python-apps application. Build by using Embedded Python and Python Flask Web Framework.
Application also demonstrates some of the Python functionalities like Data Science, Data Plotting, Data Visualization and QR Code generation.

image

Features

  • Responsive bootstrap IRIS Dashboard

  • View dashboard details along with interoperability events log and messages.

  • Use of Python plotting from IRIS

  • Use of Jupyter Notebook

  • Introduction to Data Science, Data Plotting and Data Visualization.

  • QR Code generator from python.

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Article
· Feb 8, 2022 1m read
GlobalToJSON-embeddedPython-pure

I have created a package to export a Global into JSON object file and to re-create it by reloading from this file
embeddedPython refers to the new available technologies. It should be understood as a learning exercise of
how to handle the language interfaces. Only Global nodes containing data are presented in the generated JSON file.
Differently from the previous example, this one is using embedded Python only, no ObjectScript. Therefore PURE

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I have just created a new Global Master Topic, "IRIS Cheatsheets". IRIS has introduced a lot of new functionality, especially in scripting languages, FHIR R4 support, enhanced Interoperability Tools, and IRIS Analytics. Having spent 35 years working on Windows-based PC's and Laptops, I have surprisingly little knowledge of Linux, Docker and Git. Furthermore, I have written almost every application and Interface in ObjectScript with splatterings of SQL, .Net, and Java Gateways and the most basic knowledge of WinSCP, Putty, SSH. All that changed when I received my first Raspberry Pi.

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