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#Python

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Python is an interpreted high-level programming language for general-purpose programming. Created by Guido van Rossum and first released in 1991, Python has a design philosophy that emphasizes code readability, notably using significant whitespace

Official site.

InterSystems Python Binding Documentation.

Is there a way to automatically transform Object Script arrays to Python lists? This code results in a list of arrays

Iter0 =  dbnative.iterator("HS.Data.OIDMapD")
for subscript, value in Iter0.items():
    print(f"subscript={subscript}, value={value}")

Here is the result:

subscript=1, value=2.16.840.1.113883.3.86ISCInterSystems Corporation

I suppose it would be too hard to parse this into a list, I was just wondering if there was a function provided to make it convenient and proper.

Thanks,

Marlin Mixon

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Question
· Oct 27, 2020
Configure IRIS using Python

I am trying to configure IRIS using python. The first task I wanted to do it change the journal directory. I cannot figure out the right way to work with the Config.Journal class with python. I can get the text to query the current setting.

returnValue = dbnative.classMethodValue("Config.Journal","GetList")
print(returnValue )

But I don't see a straightforward way to parse the $List returned by GetList() I was hoping there was an easier way.

How do I

1. Query configuration parameters?

2. Set configuration parameters?

Using python?

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Using VECTOR_COSINE() in SQL query to perform a text similarity search on existing embeddings in a %VECTOR column.

Code is below.

Commented out sql query returns this error: SQLCODE: -29 Field 'NEW_EMBEDDING_STR' not found in the applicable tables^ SELECT TOP ? maxID , activity , outcome FROMMain .AITest ORDER BY VECTOR_COSINE ( new_embedding_str ,

Sql query as written returns ERROR #5002: ObjectScript error: <PYTHON EXCEPTION> *<class 'OSError'>: isc_stdout_write: PyArg_ParseTuple failed!

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I am writing a Python tool to query our cache instances for various information. I have set up the connection without issue:

import intersys.pythonbind3 as pyb

conn = pyb.connection()
conn.connect_now(.....)

db = pyb.database(conn)
qry = pyb.query(db)
obj = pyb.object(db)

I wanted to make the call:

execRes = qry.prepare_class("SYS.Database",'FreeSpace')

But fetching fails because of data mismatches ( as I understand from other posts) and my testing bears out this type of failure.

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So, I know that I can return a SQL Error message from my SQL Procedure written in ObjectScript, with code like this

$ cat <<EOF | irissqlcli iris://_SYSTEM:SYS@localhost:1972/USER
CREATE or REPLACE PROCEDURE test()
LANGUAGE OBJECTSCRIPT
{
 SET %sqlcontext.%SQLCODE = 400
 SET %sqlcontext.%ROWCOUNT = -1
 SET %sqlcontext.%Message = "test error message"
};

CALL test();

EOF
[SQLCODE: <-400>:<Fatal error occurred>]
[Location: <SPFunction>]
[%msg: <test error message>]

But I did not find how to do it with Python. I can't find %sqlcontext variable available there

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I am sending an httpRequest from ObjectScript to a python server. I am not receiving a response in OS

OS config On the client side

// Create an HTTP request object
Set httpRequest = ##class(%Net.HttpRequest).%New()

// Set the server URL
Set httpRequest.Server = "http://127.0.0.1:8080"

// Set content type to JSON
Set httpRequest.ContentType = "application/json"

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Hi,

In my Iris Installation I cannot use python. When I try to install external libraries I get no OPENSSL_Applink:

$ pwd
/cygdrive/c/InterSystems/IRIS2/bin
$ ./irispip install --target ../Mgr/python/ pandas
OPENSSL_Uplink(00007FFBEC2F7068,08): no OPENSSL_Applink

I get the same error when I try to install a wheel file:

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Hi all,

Does anybody have the same issue?

$ZF(-100) to run python script not work when directly execute in studio or in storedproc called by TrakCare, but can work when do in iris session.

The python script imports a "barcode" package. It seems that when directly execute in studio or in storedproc called by TrakCare, the package can not be imported.

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Hello,

I believe that the Perl and Python bindings that exist on Cache / Ensemble do not exist on IRIS for Health 2020.1 ... is that correct?

Is there any similar documentation and samples (like below) , that show an example of how to run a basic Perl or Python script that connects with ODBC or whatever the recommended way?

http://docs.intersystems.com/cache20102/csp/docbook/DocBook.UI.Page.cls?...

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Hi,

I am using embeded python to utilize some pythonic library but i got a problem on my hand.

One of the python function i am using return multiple values

in python you would do something like that :

val1, val2, val3, = function(params)

In COS I got something like that :

lib = ##class(%SYS.Python).Import("lib")
val1 = lib.function(params)

And I don't know how to get the second and third values.
Is there a way to get them?

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import os

# Get environment variables
db_host = os.getenv('DB_HOST')
db_port = os.getenv('DB_PORT')
db_namespace = os.getenv('DB_NAMESPACE')
db_username = os.getenv('DB_USERNAME')
db_password = os.getenv('DB_PASSWORD')

# Create a database connection
conn = irisnative.createConnection(db_host, db_port, db_namespace, db_username, db_password)

# Create an IRIS instance from this connection
iris_native = irisnative.createIris(conn)

status = iris_native.classMethodValue('%SYSTEM.OBJ', 'Load', 'Production.cls', 'ck')

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Hello,

I've recently updated the python version of a linux server running Red Hat Enterprise Linux 8.10 (Ootpa). We have an instance 2023.1 running there, and whenever I run the $System.Pyhthon.Shell() I can see it's still pointing to the old version. From within linux, it runs the latest one (we've change all the links to the new 3.11, so no scripts are broken).

So I guess the problem comes from the fact irispython is still compiled using old python version. So, how can I do to force IRIS to use the current version on the server, or update the irispython file?

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Hello,

First of all thanks for your time, thoughts, teaching and help:

We wonder how could we get the metrics from http://[Ip]:[Port]/api/monitor/metrics and use them in Kibana to chart statistics.

We would like to ask you how do you use the api monitor metrics, and as a second question, how would you suggest to utilize them in a third party software as Kibana to chart them.

We have thought to do the following:

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Hello everybody,

I've been experimenting with Embedded Python and have been following the steps outlined in this documentation: https://docs.intersystems.com/irislatest/csp/docbook/DocBook.UI.Page.cls...

I'm trying to convert a python dictionary into an objectscript array but there is an issue with the 'arrayref' function, that is not working as in the linked example.

This is a snapshoot of my IRIS terminal:

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Using the below python script I am getting :

$ ./hello_world.py
Traceback (most recent call last):
File "/home/wwillett/dev/vscode-objectscript/Samples-python-helloworld/./hello_world.py", line 34, in <module>
run()
File "/home/wwillett/dev/vscode-objectscript/Samples-python-helloworld/./hello_world.py", line 21, in run
connection = irisnative.createConnection(ip, port, namespace, username, password)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
RuntimeError: * [ERROR_SEQUENCE_ERROR]

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Question
· Dec 2, 2024
Python installation

Hi Community,

I have installed python from https://www.python.org/downloads/

and the installed path of this application is my local C:\Users\data\AppData\Local\Programs\Python

and i am trying to run C:\InterSystems\IRIS_SANDBOX\bin>irispip install in command prompt and getting the below error

'pip' is not recognized as an internal or external command,
operable program or batch file

is there anything else i am missing here please add

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Question
· Oct 2, 2024
Python.net Install

This is for IRIS For Health 2024.2.0

We are migrating away from the .NET Gateway and trying to use the python integration instead.

I followed the instructions to install IRIS

Then I installed python following the IRIS documentation indicating that python should be installed globally.

I set up the PythonRuntimeLibrary and PythonRuntimeLibraryVersion options under System->Configuration->Advanced memory settings and when I run the shell function, I get python:

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After running many tests to kick the tires calling Python from COS (which worked fine) in any directory, I encountered problems when trying to access Python libraries like Numpy from any OTHER namespace. I saw some other posts about this but the resolution seems unclear. When I run the test program method numpytest below in %SYS it works just fine. If i run the Python method in any other namespace I get:

PITT>do ##class(test.python).numpytest()
DO ##CLASS(test.python).numpytest()
^
<OBJECT DISPATCH> *python object not found

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Hi all,

Some days ago, I've seen a youtuber talking about how to create a neural network (sorry, is in spanish)

https://www.youtube.com/embed/iX_on3VxZzk
[This is an embedded link, but you cannot view embedded content directly on the site because you have declined the cookies necessary to access it. To view embedded content, you would need to accept all cookies in your Cookies Settings]

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If anyone has experience debugging Embedded Python or has insight into why an ObjectScript method when called from a Python method would not work but would work when called directly via ObjectScript or in a Python shell, your help would be appreciated!

We have an ObjectScript ClassMethod called GetTemplateString() which takes in a templateName of String type and uses the template name to get the template object, access the Code, and read the code into a templateString. The string version of the Code is returned.

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Question
· Jul 10, 2024
Component registration

When registering the components: I used this command:
"Utils.migrate("/external/src/CoreModel/Python/settings.py)" ;
The error appears: "An error has occurred: iris.cls: error finding class",
I changed with these two lines:
result = subprocess.run(["iop", "-m", "/external/src/CoreModel/Python/settings.py"], stdout=subprocess.PIPE, stderr=subprocess.PIPE, check=True)
subprocess.run(["iop", "-m", "/external/src/CoreModel/Python/settings.py"], stdout=subprocess.DEVNULL, stderr=subprocess.DEVNULL, check=True)

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My usecase is sorting and removing duplicates and getting count from a file that has json messages as a individual rows.

I am currently planning to use pandas for this purpose as its really fast. Below are the steps i am following

1) call a python function (called function) from IRIS classmethod(calling function)

2) the call python function will read the json file in a dataframe

3) perform sorting, dup removal, count in the dataframe

4) convert the dataframe into iris stream

5) return back the stream to iris calling function class method

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