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Using SQL Gateway with Python, Vector Search, and Interoperability in InterSystems Iris

Part 2 – Python and Vector Search

Since we have access to the data from our external table, we can use everything that Iris has to offer with this data. Let's, for example, read the data from our external table and generate a polynomial regression with it.

For more information on using python with Iris, see the documentation available at https://docs.intersystems.com/irislatest/csp/docbook/DocBook.UI.Page.cls?KEY=AFL_epython

Let's now consume the data from the external database to calculate a polynomial regression. To do this, we will use a python code to run a SQL that will read our MySQL table and turn it into a pandas dataframe:

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Hence the question: is there a way to do that?

The goal is to get data (from half a thousand to 3-4 thousands lines) from DB, calculate standart deviation then use it as logical condition in analyzer.

For example IF std > custom_value = show_the_result ELSE null

There is a STDDEV(MDX) method used in Analyzer but it is a measure and it can not be used as logical condition (correct me if i am wrong)

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#InterSystems Demo Games entry


⏯️ Health Evolve: Transforming Unstructured Data

Did you know that 80% of healthcare data is stuck in unstructured formats such as fax? If you take a walk down to Mass General in Boston, you'll literally see a state-of-the-art MRI machine next to a fax machine. Healthcare keeps building incredible new technology but can't let go of legacy technology. We call this the "legacy modernization paradox". This short film follows a care manager at Blue Plan who spends her days doing chart reviews, reading faxes line-by-line, struggling to provide her members the care they need. Everything changes when Blue Plan pilots InterSystems Health Evolve, a solution that transforms her faxes into machine-readable FHIR data ready for AI and analysis. To access our fully working Text-to-FHIR prototype, visit HealthEvolve.de.

Presenters:
🗣 @Vishal Pallerla, Sales Architect, InterSystems
🗣 @Erica Song, Sales Engineer, InterSystems
🗣 @Louis Kabelka, Sales Engineer, InterSystems
🗣 Zelong Wang, Sales Engineer, InterSystems
🗣 John Murtha, Health Plan Executive, InterSystems

https://www.youtube.com/embed/FcL1u3Ir0jM
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Hello,

I want to upload a "custom" metric in prometheus (queue).

For now, in version 2022, I have the impression that we cannot add multiple labels and yet the basic metrics know how to do it.

ex: standard metric

iris_interop_messages_per_sec{cluster="1", host="xxxx", id="API", instance="xxxx:80", job="SAM", production="xxxx"}

my current example: I would like to be able to at least add the production, just to have the source of the measurement.

my_iris_queue{cluster="1", id="xxxx", instance="xxx", job="SAM"}

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I'm playing with some anayltic queries against FHIR server tables. The HSFHIR_X0002_S_Patient.addressCity table contains a lot of cities which names contain german charachers such as ä, ö and ü.

The following query works fine:

select value from HSFHIR_X0002_S_Patient.addressCity

But this one converts city names to uppercase, and characters with umlauts are lost, so instead of "Köln" or "München" I see KOLN and MUNCHEN:

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There are a select few in the group that have been using Github as a Local Client push to a Repository setup in GitHub. Questions were brought up today about the security, and possible issues when it comes to data being pushed in this method.

Looking over code we have noticed that there is Histogram data within some of the class files that could be considered a security issue. Does anyone else have concerns with the Histogram data being within the class files pushed up to github?

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json file failing in conversion to SDA

  • DO^zToQuickXML+11^HS.SDA3.NVPair.1 +2
  • DO^zToQuickXML+34^HS.SDA3.CustomObject.1 +1
  • DO^zToQuickXML+8^HS.Local.SDA3.CodeTableDetail.HealthCareFacilityExtension.1 +1
  • DO^zToQuickXML+28^HS.SDA3.CodeTableDetail.HealthCareFacility.1 +1
  • DO^zToQuickXML+6^HS.SDA3.Location.1 +1
  • DO^zToQuickXML+12^HS.Local.SDA3.ProcedureExtension.1 +1
  • DO^zToQuickXML+29^HS.SDA3.Procedure.1 +1
  • DO^zToQuickXML+155^HS.SDA3.Container.1 +1
  • $$^zToQuickXMLStream+5^HS.SDA3.QuickXML.1 +1
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I want to try out iris-DataViz app to visualize my own data. I cloned the repo and docker-compose up -d in AWS. IRIS portal works, but on port 8051 I get nothing. I checked my AWS security groups. I reversed IRIS webserver port and 8051 and I can connect to Management portal using port 8051. I don't understand what is refusing connection on port 8051 running in iris-DataViz container.

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I am trying to use IRIS for Health as a Facade for an external FHIR Server, where IRIS provides the proper authentication.
The client authenticates using a bearer token obtained from the IRIS OAuth2 server via a jwt client assertion.
The IRIS endpoint, however, returns a 401 as soon as I remove the Unauthenticated access

Is there w way to make this work through configuration?

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#InterSystems Demo Games entry


⏯️ Closing the Scientific Knowledge Gap with AI

For venture capitalists (VCs), evaluating research can be challenging. While researchers typically possess years of training and deep expertise in their field, the VCs tasked with assessing their work often lack domain-specific knowledge. This can lead to incomplete understanding of scientific data and an inability to direct organizational initiatives. To solve this problem, we have designed a solution that empowers VCs with AI-driven due diligence: ResearchExplorer. ResearchExplorer is powered by InterSystems IRIS and GPT-4o to help analyze private biomedical research alongside public sources like PubMed using Retrieval-Augmented Generation (RAG). Users submit natural language queries, and the system returns structured insights, head-to-head research comparisons, and AI-generated summaries. This allows users to bridge expertise gaps while securely protecting proprietary data.

Presenters:
🗣 @Jesse Reffsin, Senior Sales Engineer, InterSystems
🗣 @Lynn Wu, Sales Engineer, InterSystems

https://www.youtube.com/embed/zsV3LhGDP1Q
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Until now i used $ZF(-1), in older Caché versión, now I try to use $ZF(-100), i do:

REST>w $ZV
Cache for Windows (x86-64) 2018.1.4 (Build 505_1) Thu May 28 2020 10:12:49 EDT
REST>s a=$zf(-100,"/SHELL","dir")
 
S a=$ZF(-100,"/SHELL","dir")
^
<NOTOPEN>

What is wrong?

Thanks in advance

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Hello, Does the NodeJs package work when running a node js file on windows (nodejs for windows)? I've added the package by running npm install <package location folder>

I have the following index.js file, but when running from node (windows) I get the following error. Does the NodeJs package build the output files when the package is added or does it just assume linux as the underlying os?

Error: Cannot find module './bin/winx64/irisnative.node'

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I need to connect to a SFTP server and I seem to connect and timeout have tested the connection using File-zilla and the connection was successful but the problem is when I try to connect using the FTP in bound adapter service I get the following errors.

ERROR <Ens>ErrOutConnectExpired: FTP Connect timeout period (120) expired for ***************.com:990/******/SSL='********* + ERROR <Ens>ErrFTPConnectFailed: FTP: Failed to connect to server ***************.com:990/******/SSL='********* (msg='Timeout waiting for response',code=529)

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We're excited to announce the first-ever UI update for CCR Client Tools. The Client Tools UI has been upgraded to match the modern CCR UI, aiming to create a more seamless experience across both applications. The color scheme, fonts, and style elements have all been updated accordingly in the new UI:

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My IRIS instance is connected to a Postgres database using SQL Gateway and linked tables.
One of these tables is projected to the Patient class. I want to select a record from this table by ID and convert it to a FHIR resource using the %ExistsId and %OpenId methods.
I noticed that if I call these two methods from the console, the record is always found.

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Hi Community,

Enjoy the new video on InterSystems Developers YouTube:

Adapt AI to your Existing Architecture @ Global Summit 2024

https://www.youtube.com/embed/odGAzFwsB5E
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