go to post Eduard Lebedyuk · Sep 28, 2022 You need to create HS.SDA3.Container object in Transform method before using it. Something like this: Class Hosiptal.SDA3.DataTrans Extends Ens.DataTransform { ClassMethod Transform(source As EnsLib.HL7.Message, ByRef target As HS.SDA3.Container, aux) As %Status { #Dim sc As %Status = $$$OK Set sc = ##class(HS.Gateway.HL7.HL7ToSDA3).GetSDA(source, .xml) Quit:$$$ISERR(sc) sc Set target = ##class(HS.SDA3.Container).%New() Set sc = target.InitializeXMLParse(.xml) Quit sc } }
go to post Eduard Lebedyuk · Sep 27, 2022 %String as defined by OP (without MAXLEN) only holds 50 characters, %VarString holds 3641144.
go to post Eduard Lebedyuk · Sep 26, 2022 Check the docs from @Marc Mundt, specifically Binary Contains.
go to post Eduard Lebedyuk · Sep 26, 2022 Great! What's the purpose of: C:\InterSystems\IRISHealth\bin>irispip install --target C:\InterSystems\IRISHealth\mgr\python numpy
go to post Eduard Lebedyuk · Sep 23, 2022 You can generate methods using Native API for Python, so technically yes.
go to post Eduard Lebedyuk · Sep 23, 2022 Define a custom class query with Exec/Fetch methods in python, after that call this query from a method with ReturnResultsets enabled. Or just call custom class query from SQL.
go to post Eduard Lebedyuk · Sep 23, 2022 I'd suggest using source control and CI/CD to track changes. Additionally you can add parent commit hash and compile time automatically.
go to post Eduard Lebedyuk · Sep 22, 2022 If I'm using an objectgenerator, is there a way to check the compile flags and have it behave differently based on which flags are set? A very exciting way to introduce some unexpected behavior down the line. What is your use case? And as a tangent, is there a list somewhere of what compile flags there are? Sure: do $system.OBJ.ShowFlags() do $system.OBJ.ShowQualifiers()
go to post Eduard Lebedyuk · Sep 22, 2022 If you get access error on Linux: javaldx failed! Warning: failed to read path from javaldx LibreOffice 7.3 - Fatal Error: The application cannot be started. User installation could not be completed. LibreOffice user installation could not be processed due to missing access rights. Please make sure that you have sufficient access rights for the following location and restart LibreOffice. Add this to LibreOffice parameters: set args($i(args)) = "-env:UserInstallation=file:///tmp/libreofficehome/" where /tmp/libreofficehome is any empty folder InterSystems IRIS has write access to.
go to post Eduard Lebedyuk · Sep 22, 2022 If there's a text layer use LibreOffice to convert to txt (InterSystems IRIS wrapper), for OCR you'll need some thirdparty tool, for example Tesseract can be easily used with Embedded Python. UPD: LibreOffice can't extract text from PDFs unfortunately. Here's Embedded Python solution: Class User.PDF { /// zw ##class(User.PDF).GetText("/tmp/example.pdf", .text) ClassMethod GetText(file, Output text) As %Status { try { #dim sc As %Status = $$$OK kill text set dir = $system.Util.ManagerDirectory()_ "python" do ##class(%File).CreateDirectoryChain(dir) // pip3 install --target /data/db/mgr/python --ignore-requires-python typing==3.10.0.0 try { set pypdf2 = $system.Python.Import("PyPDF2") } catch { set cmd = "pip3" set args($i(args)) = "install" set args($i(args)) = "--target" set args($i(args)) = dir set args($i(args)) = "PyPDF2==2.10.0" set args($i(args)) = "dataclasses" set args($i(args)) = "typing-extensions==3.10.0.1" set args($i(args)) = "--upgrade" set sc = $ZF(-100,"", cmd, .args) set pypdf2 = $system.Python.Import("PyPDF2") } return:'$d(pypdf2) $$$ERROR($$$GeneralError, "Unable to load PyPDF2") kill pypdf2 set text = ..GetTextPy(file) } catch ex { set sc = ex.AsStatus() } quit sc } ClassMethod GetTextPy(file) [ Language = python ] { from PyPDF2 import PdfReader reader = PdfReader(file) text = "" for page in reader.pages: text += page.extract_text() + "\n" return text } }
go to post Eduard Lebedyuk · Sep 22, 2022 1. I have a PDF file which I need to read from a folder location as text and put data from PDF into HL7 message and send it to downstream system. Do you mean OCR/text layer extraction? 2. I have a PDF file which I need to read from a folder location encode it in base64 and put in OBX.5 of MDM message Do it like this.
go to post Eduard Lebedyuk · Sep 19, 2022 Have you tried executing the same code from the InterSystems terminal? Also try: text = self.db.run_class_method("%SYSTEM.Status", "GetErrorText", res) print(text)
go to post Eduard Lebedyuk · Sep 19, 2022 The only success status is 1. Anything else is an error or invalid status.
go to post Eduard Lebedyuk · Sep 16, 2022 Try to reload like this: set importlib = ##class(%SYS.Python).Import("importlib") do importlib.reload(helloWorld) Also, it not an IRIS-specific behavior, you'll get the same results in any python interpreter: import helloWorld helloWorld.helloWorld() >'Hello world' del helloWorld # modify helloWorld.py in text editor import helloWorld helloWorld.helloWorld() >'Hello world'