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It is the number of IG's I have which is the issue.
Only my NW Genomic IG has Codesystems, ValueSets and for test - examples, I wish to load. I'm not interested in FHIR profiles. 
Thanks, that has been very useful.
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I think what I need to do is write some code to import my IG, find the relevant parts and then update the FHIR Repository.